[Required] What features (new params, inputs, outputs, etc) would you like to add to each?
Add reference files and test input locations if applicable
Change dockerPull: 'rocker/tidyverse:3.5.3' to an image that has tidyverse and optparse already installed. Currently, wach yimt it runs, it installs it, but the install links are now out of date. Using one that does not need install is preferred, like: pgc-images.sbgenomics.com/d3b-bixu/annofuse:0.92.0
[Optional] How long do you think this work will take?
30 minutes - probably 29 to download the repo, 1 to fix
[Optional] Who will complete this work?
@migbro
Ticket will be considered resolved either by a successful PR with updated release if applicable, or a simple denial of the request backed by a good reason
jharenza
commented
4 months ago
✨
[Required] Is this a new tool/workflow?
No
[Required] Which tools/workflows would you like to update/add?
Provide software links and
dockerPulllocation if applicableanalyses/collapse-rnaseq/cwl/tools/convert_to_rds.cwl
[Required] What features (new params, inputs, outputs, etc) would you like to add to each?
Add reference files and test input locations if applicable
Change
dockerPull: 'rocker/tidyverse:3.5.3'to an image that has tidyverse and optparse already installed. Currently, wach yimt it runs, it installs it, but the install links are now out of date. Using one that does not need install is preferred, like:pgc-images.sbgenomics.com/d3b-bixu/annofuse:0.92.0[Optional] How long do you think this work will take?
30 minutes - probably 29 to download the repo, 1 to fix
[Optional] Who will complete this work?
@migbro
Ticket will be considered resolved either by a successful PR with updated release if applicable, or a simple denial of the request backed by a good reason