update runs to checkout@v4 to use node20 since node16 is deprecated

[jharenza]

Purpose/implementation Section

What scientific question is your analysis addressing?

1. As in #554 and #555, there is a persistent issue with the CRANIO module in that it appears that disk space is being exhausted. I am attempting some cleanup steps per the comments here.

2. I am pre-emptively updating to actions v4 which uses node 20 per the warning:

   Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

What was your approach?

I remove all swap files, all old docker images, cache, unused packages prior to each analysis run.

What GitHub issue does your pull request address?

NA

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

Is there anything that you want to discuss further?

Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?

Results

What types of results are included (e.g., table, figure)?

What is your summary of the results?

Reproducibility Checklist

• [ ] The dependencies required to run the code in this pull request have been added to the project Dockerfile.
• [ ] This analysis has been added to continuous integration.

Documentation Checklist

• [ ] This analysis module has a README and it is up to date.
• [ ] This analysis is recorded in the table in analyses/README.md and the entry is up to date.
• [ ] The analytical code is documented and contains comments.