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d3b-center / OpenPedCan-analysis

The analysis repository for the Open Pediatric Cancer Project
https://d3b-center.github.io/OpenPedCan-analysis/
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Updated analysis: add PPTID to PB subtyping #590

Open jharenza opened 3 weeks ago

jharenza commented 3 weeks ago

What analysis module should be updated and why?

PB subtyping

What changes need to be made? Please provide enough detail for another participant to make the update.

Add PPTID subtypes, as they were missed https://github.com/d3b-center/OpenPedCan-analysis/blob/e289e49294f22401284153e191a85b4a6bfc887b/analyses/molecular-subtyping-PB/01-molecular-subtype-pineoblastoma.Rmd#L41-L49

What input data should be used? Which data were used in the version being updated?

methylation

When do you expect the revised analysis will be completed?

Who will complete the updated analysis?