d3b-center clinical-data-flow issues

d3b-center / clinical-data-flow

📓Project management and design artifacts for Clinical Data Flow

https://handbook.d3b.io/docs/products/clinical-data-flow

Apache License 2.0

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Implement, Test, Review Ingest Library Refactor

#67 znatty22 closed 4 years ago
1
FHIR Data Dashboard Server Config

#66 znatty22 closed 4 years ago
0
Redesign parts of Dashboard UX

#65 znatty22 closed 4 years ago
1
Get Kids First IG published

#64 znatty22 closed 4 years ago
0
Spec out, create, and implement release process for kf-model-fhir

#63 znatty22 closed 4 years ago
0
Map Kids First Phenotype to FHIR

#62 znatty22 closed 4 years ago
2
Python mappers for Phenotype FHIR resource

#61 znatty22 closed 4 years ago
1
Create Phenotype StructureDefinition

#60 znatty22 closed 4 years ago
1
Map Kids First Study and Diagnosis to FHIR

#59 znatty22 closed 4 years ago
0
Load initial Kids First FHIR Model into server

#58 znatty22 closed 4 years ago
0
Spec out naming conventions for FHIR model files

#57 znatty22 closed 4 years ago
1
Generate search parameters for Participant, Biospecimen, Phenotype

#56 znatty22 closed 4 years ago
1
Create Biospecimen StructureDefinition

#55 znatty22 closed 4 years ago
1
Create Participant StructureDefinition

#54 znatty22 closed 4 years ago
1
Generate Extensions for Participant, Biospecimen, Phenotype

#53 znatty22 closed 4 years ago
1
Kids First FHIR Extension spreadsheet: Participant, Biospecimen

#52 znatty22 closed 4 years ago
1
Python Mapper for KF Phenotype FHIR resource

#51 znatty22 closed 4 years ago
1
Python mapper for Biospecimen Resource

#50 znatty22 closed 4 years ago
1
Write an Extension generation script

#49 znatty22 opened 4 years ago
1
Load PCGC data into FHIR server

#48 znatty22 closed 4 years ago
0
📝 Update README + Arch with FHIR things

#47 znatty22 closed 4 years ago
0
Make it easier for developers to setup CDF tools + env

#46 znatty22 opened 4 years ago
0
Python mappers for Participant FHIR resource

#45 znatty22 closed 4 years ago
1
Kids First MVP FHIR Model

#44 znatty22 closed 4 years ago
0
Kids First Data Service to FHIR mapping spreadsheet: PT, BS

#43 znatty22 closed 4 years ago
2
Prepare for Kids First FHIR Model Development

#42 znatty22 closed 4 years ago
0
FHIR Data Dashboard Wrap-up

#41 znatty22 closed 4 years ago
0
📝💡 Add CDF 2020 objectives and key results

#40 znatty22 closed 4 years ago
0
Document feedback on FHIR Phenopackets and lessons learned on FHIR Ingest

#39 znatty22 closed 4 years ago
3
Load actual NCIT and MONDO codes for disease instances

#38 znatty22 closed 4 years ago
1
Secure FHIR server with TLS

#37 znatty22 closed 4 years ago
0
Load actual HPO codes for PCGC phenotype observations

#36 znatty22 closed 4 years ago
1
Generate PFB file for PCGC study

#35 znatty22 closed 4 years ago
2
Enable searching of resources by added attributes (extensions)

#34 znatty22 closed 4 years ago
2
Ingest Kids First studies into D3b Warehouse

#33 znatty22 closed 4 years ago
3
🐛 Fix postgres data volume

#32 znatty22 closed 4 years ago
0
📝 Match the warehouse readme to lib docs

#31 fiendish closed 4 years ago
0
Deploy ingest warehouse to production

#30 znatty22 opened 4 years ago
0
Load CHOP RIMGC GIC dataset into FHIR server

#29 znatty22 closed 4 years ago
2
Support ingestion of Kids First studies

#28 znatty22 opened 4 years ago
2
Simplify FHIR model development workflow via upgrade to new IG structure

#27 znatty22 closed 4 years ago
2
Explore the utility of PFB (Portable Bioinformats Format)

#26 znatty22 closed 4 years ago
0
FHIR Data Dashboard Features + Refinements

#25 znatty22 closed 4 years ago
0
Investigate search optimization for FHIR Data Dashboard

#24 znatty22 closed 4 years ago
2
Planning + Design Automated QC/Accounting

#23 znatty22 closed 4 years ago
1
Maintenance/Support of Ingest Library

#22 znatty22 opened 4 years ago
0
Begin prototyping a FHIR data profiler/browser

#21 znatty22 closed 4 years ago
0
Create and load search parameters for Phenopackets FHIR model

#20 znatty22 closed 4 years ago
1
User and permissions management for warehouse

#19 znatty22 opened 4 years ago
0
🙈 Ignore .env file

#18 znatty22 closed 4 years ago
0

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