d3b-center / pbta-splicing

Splicing analysis across the PBTA
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Updated analysis: categorize diff splicing categories #191

Closed naqvia closed 7 months ago

naqvia commented 10 months ago

What are the scientific goals of the analysis and which module needs to be updated?

We want to update the splicing events module to show the proportion of aberrant splicing that are non-flip, flip and mixed in one plot for easier visualization so we could better interpret biological significance.

What methods do you plan to use to accomplish the scientific goals?

Stacked barplot

What input data are required for this analysis?

splicing_events.total.neg.tsv splicing_events.total.pos.tsv

How long do you expect is needed to complete the analysis? Will it be a multi-step analysis?

1-2 days

Who will complete the analysis (please add a GitHub handle here if relevant)?

@naqvia

What relevant scientific literature relates to this analysis?

NA

naqvia commented 7 months ago

completed and merged