d3b-center / ticket-tracker-OPC

A repo to generate and track tickets for ped OT
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Updated analysis: Fusion frequencies to use DGD fusion file in `data/` #506

Closed jharenza closed 1 year ago

jharenza commented 1 year ago

What analysis module should be updated and why?

fusion frequencies

What changes need to be made? Please provide enough detail for another participant to make the update.

The current module uses a fusion annotator annotated DGD file which was created ad hoc for v11 since the DGD fusion file in data was not previously annotated. In v12, this file will have been annotated and we can now pull it from data.

What input data should be used? Which data were used in the version being updated?

v12

When do you expect the revised analysis will be completed?

after v12 release

Who will complete the updated analysis?

?

jharenza commented 1 year ago

Closed with https://github.com/PediatricOpenTargets/OpenPedCan-analysis/pull/321