daducci / AMICO

Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data

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v2.0.0 #166

Closed nightwnvol closed 1 year ago

nightwnvol commented 1 year ago

Changed

[x] multithreading 🚀
[x] new NODDI maps name
- from ICVF to NDI
- from OD to ODI
- from FISO to FWF
[x] default ndirs=500
[x] default study_path='.' and subject='.' in core.Evaluation()
[x] expire the deprecated ndirs parameter in core.setup()
[ ] replace tqdm with dicelib.ui.ProgressBar()

Added

[x] modulated NODDI maps for Tissue-Weighted Mean
[x] BLAS_n_threads config
[x] doComputeRMSE config
[x] DTI_fit_method config

Fixed

[x] DeprecationWarning: dipy.reconst.shm.real_sym_sh_basis (with dipy>=1.4.0)