Installation fails despite all dependencies are installed

[Npaffen]

Which version was used?

This behavior can be repeated with either the release or the dev version.

Which R version and which OS was used?

platform       x86_64-pc-linux-gnu         
arch           x86_64                      
os             linux-gnu                   
system         x86_64, linux-gnu           
status                                     
major          4                           
minor          1.2                         
year           2021                        
month          11                          
day            01                          
svn rev        81115                       
language       R                           
version.string R version 4.1.2 (2021-11-01)
nickname       Bird Hippie  

What is the error message that appears?

Release and dev version fail with the same error :

Downloading GitHub repo daewoooo/StrandPhaseR@devel
── R CMD build ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔  checking for file ‘/tmp/Rtmp2iinK2/remotes2c5de06d83bf8b/daewoooo-StrandPhaseR-9b56198/DESCRIPTION’ ...
─  preparing ‘StrandPhaseR’:
✔  checking DESCRIPTION meta-information ...
─  checking for LF line-endings in source and make files and shell scripts
─  checking for empty or unneeded directories
─  building ‘StrandPhaseR_0.99.tar.gz’

Installing package into ‘/home/nils/R/x86_64-pc-linux-gnu-library/4.1’
(as ‘lib’ is unspecified)
* installing *source* package ‘StrandPhaseR’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error: object ‘genotype.binom’ is not exported by 'namespace:breakpointR'
Execution halted
ERROR: lazy loading failed for package ‘StrandPhaseR’
* removing ‘/home/nils/R/x86_64-pc-linux-gnu-library/4.1/StrandPhaseR’
Warning message:
In i.p(...) :
  installation of package ‘/tmp/Rtmp2iinK2/file2c5de025acc1d7/StrandPhaseR_0.99.tar.gz’ had non-zero exit status

This behaviour might be related to this issue [https://github.com/HenrikBengtsson/R.utils/issues/29]() but I'm not entirely sure.

[daewoooo]

Thanks for reporting. I will resolve this next week as I'm traveling right now.