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dahak-metagenomics / dahak

benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
https://dahak-metagenomics.github.io/dahak
BSD 3-Clause "New" or "Revised" License
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Dockerfiles directory #63

Closed charlesreid1 closed 6 years ago

charlesreid1 commented 6 years ago

Just curious about the docker_files folder and the Dockerfiles contained therein - should we submit these as recipes to bioconda? (Or has @brooksph already done that?) It might be good to add a short README to that directory.

charlesreid1 commented 6 years ago

Is this related to #40?

brooksph commented 6 years ago

Some of these were created as temporary work-a-rounds for broken containers in the biocontainers project which have since been updated. I’ll sort through this and create a README.

On Mar 14, 2018, at 3:40 PM, Chaz Reid notifications@github.com wrote:

Is this related to #40?

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charlesreid1 commented 6 years ago

Per https://github.com/bioconda/bioconda-recipes/issues/8586, we may run into issues with some of the containers as versions change/updates occur, so we may want to keep these around somewhere, and/or provide an example of using a custom Dockerfile in place of a quay URL in dahak-taco.