daler metaseq issues - Githubissues

daler / metaseq

Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data

https://daler.github.io/metaseq

MIT License

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issues

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cannot import name 'data_dir' from 'helpers'

#43 sqs1020 opened 2 years ago
1
Make it functional with python3

#42 opoirion opened 4 years ago
0
use of bedGraphs in genomic_signal

#41 magruca opened 5 years ago
0
Example1 problem#3 can't find metaseq

#40 rmontagn opened 5 years ago
0
subplots using metaseq.plotutils.imshow

#39 scriscio opened 5 years ago
0
Segmentation fault

#38 imk1 opened 5 years ago
0
sample snippet for the ChIP signal visualization?

#37 zhenyisong opened 6 years ago
1
how can I use the bam file to draw the figure which contain the tss ,gene body and tts? thank you!

#36 Liyi56 opened 6 years ago
3
Example1 problem #2

#35 Fiona-and-Cake opened 7 years ago
8
mapped_read_count() OSError: No such file or directory

#34 oxpeter closed 7 years ago
1
Issue 30 fix

#33 daler closed 7 years ago
0
New test framework

#32 daler closed 7 years ago
0
address #30

#31 daler closed 7 years ago
0
How is missing data interpreted?

#30 quantumdot opened 7 years ago
9
genomic_signal

#29 kellermac opened 8 years ago
10
multiprocessing

#28 kellermac opened 8 years ago
3
Bamsignal attributes

#27 kellermac closed 8 years ago
1
py3: relative imports fail

#26 endrebak opened 8 years ago
8
ValueError: x and y must have same first dimension

#25 kellermac closed 8 years ago
0
Issue with Example 1

#24 pavo closed 8 years ago
2
IndexError AND Value error

#23 kellermac closed 8 years ago
3
A problem when running the script

#22 i19870503 closed 8 years ago
4
Can the browser be used to programmatically create graphs for genes of interest?

#21 ghost closed 8 years ago
2
MetaSeq on non-traditional files that have already been binned?

#20 ghost closed 8 years ago
8
Splitting arrays

#19 kellermac closed 8 years ago
3
Example 1 problem

#18 nataliesilmon opened 8 years ago
3
genomic signal array

#17 kellermac closed 8 years ago
19
Syntax help

#16 kellermac closed 9 years ago
0
metaseq is supported by python 3?

#15 zqfang closed 9 years ago
7
Fixes bug where colormaps would be unordered

#14 grmwld closed 9 years ago
1
hg19 Random Chromosome Issues

#13 jlpulice closed 9 years ago
1
Tutorial ambiguity

#12 kellermac closed 9 years ago
3
plotutils.imshow for just a heatmap alone

#11 daler closed 9 years ago
1
evaluate CWig

#10 daler opened 10 years ago
0
clustering heatmap and identifying genes

#9 ghost closed 10 years ago
1
Too many files open

#8 semenko closed 10 years ago
3
global name stats not defined

#7 jraab closed 10 years ago
1
missing dependencies

#6 i000 closed 11 years ago
1
V0.5dev

#5 olgabot closed 11 years ago
1
Incompatible with sklearn = 0.14.1

#4 olgabot closed 11 years ago
3
SignalMiniBrowser is not defined

#3 sumanex closed 11 years ago
1
metaseq mouse mm9 gtf file ensemble error

#2 sumanex closed 11 years ago
2
install issues

#1 brwnj closed 12 years ago
3