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dancsi / OrthoCCTools

Computational coiled-coil peptide design toolkit, written in modern C++
https://www.dancsi.net/icipa
MIT License
3 stars 2 forks source link

Also add cutoff constants as command line parameters #39

Closed ajasja closed 4 years ago

ajasja commented 9 years ago

It would be good to add the cut-offs determining binding as command line parameters. (currently c1 and c2 in the code).

I have generated a file with natural heptads and calculated it's interaction scores. But due to the shorter lengths the values are larger, so different criteria determining binding/non-binding need to be used.

dancsi commented 9 years ago

Sure, adding those things as command-line switches is dancsi/CoiledCoilOrtho#1 priority.

dancsi commented 9 years ago

Done. The options are --binding-cutoff and --nonbinding-cutoff