dandanpeng / ARG_Benchmarking

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loop_pheno_sims_reps.R does not define `ms_fn` for README example #5

Open hyanwong opened 2 months ago

hyanwong commented 2 months ago

The README instructions place mssel output in small_example/example/mssel_out, but the loop_pheno_sims_reps.R does not define an appropriate ms_fn directory in this case. I assume you want to define

ms_fn <- paste(strsplit(new_argv$out, '_')[[1]][1], "/loci100_sintens0.005_N10000_nchr2000_ton0.04_toff0.02_herit1_", as.character(iter), ".RData", sep = "")

somewhere