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danielpodlesny
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samestr
SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.
GNU Affero General Public License v3.0
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- version -> 1.2024.09
#32
Closed
cschu
closed
1 month ago
cschu
commented
1 month ago
bugfixes in filter_sam:
qual strings for reverse strand alignments should now have the correct quality string
hardclipped bases are no longer converted to softclipped, preventing potential kpileup issues with non-bowtie2 and bowtie2-local alignments
filtering by minimum length has been activated
cschu
commented
1 month ago
@danielpodlesny meeeerge zhis