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danielpower1859 / HebbianEvolution

Code to run LV simulation with Hebbian evolution
MIT License
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Remove diagonal in omega visualisation #7

Closed danielpower1859 closed 8 years ago

danielpower1859 commented 8 years ago

Version without the diagonal so we can actually see differences/ structure Can I set these to “nan” and get no colour (white)

danielpower1859 commented 8 years ago

This should be prioritised as may help understand the structure of pairwise orthogonal matrices

danielpower1859 commented 8 years ago

Could just set vmin & vmax to the min/max of the non-diagonal

danielpower1859 commented 8 years ago

Why is there a diagonal in the evolvable matrix?

danielpower1859 commented 8 years ago

is it better to remove diagonal before plotting - or should the plotting function do this? Or just mask the diagonal (harder)

Are self interactions part of the evolvable or unevolvable matrix????

danielpower1859 commented 8 years ago

In the Biology direct model, there is only one "evolvable" matrix. Self interactions are set to 1. This is maintained in the current 30-08-2016 model

danielpower1859 commented 8 years ago

Seems to be resolved 👍 new function : visualise_order_weight_matrix_by_species_density_v3