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danjgale / nii-masker

Convenient command-line wrapper for nilearn's Masker objects
BSD 3-Clause "New" or "Revised" License
7 stars 3 forks source link

[ENH] Visual report #14

Closed danjgale closed 5 years ago

danjgale commented 5 years ago

Basic version of #2 finally complete. This adds jinja2 to the dependency list and moves niimasker to v0.0.2!

Lots more work to be done in enhancing these reports, but for now this should work in current use cases.

danjgale commented 5 years ago

Note: The code will need cleaning up in the future

danjgale commented 5 years ago

Reports are generated serially after data extraction. This is problematic when extracting from many images or setting --n_jobs > 1. This is now fixed with #15 where report generation in tandem with image extraction, and thus niimasker remains fully parallelizable