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danlwarren / ENMTools

ENMTools R Package
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Generic interactive plots function #83

Open danlwarren opened 6 years ago

danlwarren commented 6 years ago

It could be nice to have a single function called "interactive.plots" or something like that that takes models, species, and test results (when appropriate) and calls a dedicated interactive plot function based on that class.

danlwarren commented 6 years ago

It'd be super nice to set up some sort of interactive plots replacement for the rangebreak functions too, come to think of it. Something that plots the lines/ribbons/blobs for each replicate.

danlwarren commented 6 years ago

We could also use an interactive plot for clade objects that plots each species with a different color point.

rdinnager commented 6 years ago

Hi Dan,

I agree with all of these suggestions. As for the first one, I've just been learning how to define new functions that use S3 methods, so I think I'll try and implement that for interactive.plot. I haven't worked with the rangebreak stuff before, but I'm sure I can figure out something based on the vignette. And yes, it should support enmtools.clade object. That one should be pretty easy. I'll add a parameter to control the suitability opacity while I'm at it.

danlwarren commented 6 years ago

Oh cool, so defining a new type of S3 generic function? That'd be awesome. I was thinking of just having a wrapper function that checked classes and called the correct specific function, but if there's something S3-ish we can do so much the better.

danlwarren commented 6 years ago

Also it just occurred to me that interactive model plots should plot test data points in a different color if possible.

danlwarren commented 5 years ago

Figuring out a way to plot enmtools.clade objects like this would be awesome:

http://blog.phytools.org/2019/03/projecting-phylogenetic-tree-onto-map.html?m=1