dariober / cnv_facets

Somatic copy variant caller (CNV) for next generation sequencing
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Not able to install cnv_facets on my Mac system and on BioHPC #49

Open akhileshmishra0908 opened 2 years ago

akhileshmishra0908 commented 2 years ago

The error I am getting is this -

akhileshmishra@IMS-549548-IN-AMIRSHRA-iMac-27 ~ % conda create -n cnv Collecting package metadata (current_repodata.json): done Solving environment: done

-## Package Plan ##

environment location: /Users/akhileshmishra/miniconda3/envs/cnv

Proceed ([y]/n)? y

Preparing transaction: done Verifying transaction: done Executing transaction: done

-# To activate this environment, use -# -# $ conda activate cnv -# -# To deactivate an active environment, use -# -# $ conda deactivate

akhileshmishra@IMS-549548-IN-AMIRSHRA-iMac-27 ~ % conda activate cnv (cnv) akhileshmishra@IMS-549548-IN-AMIRSHRA-iMac-27 ~ % python --version Python 3.9.10 (cnv) akhileshmishra@IMS-549548-IN-AMIRSHRA-iMac-27 ~ % conda --version conda 4.13.0 (cnv) akhileshmishra@IMS-549548-IN-AMIRSHRA-iMac-27 ~ % conda install -c bioconda -c conda-forge cnv_facets Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

Current channels:

To search for alternate channels that may provide the conda package you're looking for, navigate to

and use the search bar at the top of the page.

It looks like cnv_facets is not there in bioconda environment. Please help me in installation.