Output of codesFromConceptSet

[catalamarti]

Should the output of codesFromConceptSet be a codelist? instead of a list of concept ids? @edward-burn

[edward-burn]

@catalamarti yes, it should work like that from 3.1.0. Do you see something different from the below?

library(CodelistGenerator)
packageVersion("CodelistGenerator")
#> [1] '3.1.0'
cdm <- mockVocabRef()
codesFromCohort(
  cdm = cdm, path =  system.file(package = "CodelistGenerator",
                                 "cohorts_for_mock_with_exclude"), 
  type = "codelist"
)
#> 
#> ── 2 codelists ─────────────────────────────────────────────────────────────────
#> 
#> - OA (2 codes)
#> - Other (1 codes)

^{Created on 2024-07-15 with reprex v2.0.2}

[catalamarti]

error was due to old version of CodelistGenerator