dask / dask-image

Distributed image processing
http://image.dask.org/en/latest/
BSD 3-Clause "New" or "Revised" License
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Bug in Imread function #340

Open NimaMojtahedi opened 1 year ago

NimaMojtahedi commented 1 year ago

Describe the issue:

Minimal Complete Verifiable Example:

# Put your MCVE code here

Anything else we need to know?:

Environment:

For some .tiff files (volumetric files, images with more than 2 dimensions), imread function returns only 1 frame. I checked pims you are using in dask-image imread and it seems it is pims issues can not load file correctly.

jakirkham commented 1 year ago

Thanks for the report! 🙏

Could you please share an image file that demonstrates this issue?

NimaMojtahedi commented 1 year ago

Unfortunately it is not possible to share the data. It is sensitive data and I cannot publicly share it. I think the issue is with tiff files bigger than 4 GB, probably saved in imagej format such as 1.11b