dasmoth / dalliance

Interactive web-based genome browser.
http://www.biodalliance.org/
BSD 2-Clause "Simplified" License
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Unable to display multiWig tracks #211

Open kb-bioinf opened 7 years ago

kb-bioinf commented 7 years ago

Biodalliance (v0.13) will not display the data in a multiWig track. The track will appear on the browser, but the data will not be displayed. There is no error suggesting biodalliance cannot find the data in the console. I cannot find any documentation regarding multiWig display in biodalliance so any help is much appreciated. I have used the following configuration using data from the FANTOM5 project:

track Total_and_max_counts_multiwig
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi off
shortLabel Total and max read counts
longLabel Total and max counts of CAGE reads
type bigWig 0 100
viewLimits 0:100
visibility full
maxHeightPixels 64:64:11
html Total_counts_multiwig

    track TotalCounts_Fwd
    parent Total_and_max_counts_multiwig
    shortLabel Total counts of CAGE reads (fwd)
    longLabel Total counts of CAGE reads forward
    type bigWig 0 100
    description Total Pooled Counts(Fwd) 
    bigDataUrl reads/ctssTotalCounts.fwd.bw
    color 255,0,0

    track TotalCounts_Rev
    parent Total_and_max_counts_multiwig
    shortLabel Total counts of CAGE reads (rev)
    longLabel Total counts of CAGE reads reverse
    type bigWig 0 100
    description Total Pooled Counts(Rev)
    bigDataUrl reads/ctssTotalCounts.rev.bw
    color 0,0,255