Can I use this tool for non-Rabl specoes?

data-fun / 3d-genome-builder

3DGB is a workflow to build 3D models of genomes from HiC data

BSD 3-Clause "New" or "Revised" License

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Open hanshanmengqi opened 8 months ago

hanshanmengqi commented 8 months ago

Hi @pierrepo,

Thank you for such an interesting tool! I am wondering if I can use the tool for non-Rabl species(e.g., tomato or drosophila).

Best, Han

pierrepo commented 8 months ago

Dear @hanshanmengqi

Thank you for using 3DGB.

I am wondering if I can use the tool for non-Rabl species(e.g., tomato or drosophila).

Yes, probably. But, 3DGB is not suitable for diploid genomes unless you have a way to differentiate both alleles.