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data2intelligence / CytoSig

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computing cytokine activities for individual cells #6

Closed ebasto closed 2 years ago

ebasto commented 2 years ago

Hi, I was wondering if for the covid dataset results presented in your paper you used the normalised (but not differential) expression profiles of the single cells?

Your paper says "For each single-cell dataset, we computed the cytokine activities for individual cells using the CytoSig model and got the mean value for each cell type in each patient" and "We recommend input differential profiles between the two conditions".

Cheers, Edgar

ebasto commented 2 years ago

Sorry, just saw someone else had asked the same question!