Hi there,
I noticed that xenome index writes by default to /tmp and doesn't error out if /tmp is out of disk space. I also noticed that setting $TMPDIR I can point it to another directory but this isn't documented. I suggest writing temporary files to the working folder, documenting $TMPDIR and possibly exposing the temporary directory as a command line argument.
mjafin
commented
7 years ago
Hi there, I noticed that
xenome indexwrites by default to/tmpand doesn't error out if/tmpis out of disk space. I also noticed that setting$TMPDIRI can point it to another directory but this isn't documented. I suggest writing temporary files to the working folder, documenting$TMPDIRand possibly exposing the temporary directory as a command line argument.