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databio / MIRA

R package for Methylation-based Inference of Regulatory Activity
http://code.databio.org/MIRA
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plotMIRAProfiles refers to sampleName from out of scope #27

Open nsheff opened 4 years ago

nsheff commented 4 years ago

https://github.com/databio/MIRA/blob/930be3b30c3b7ba88fa10e535e6bf123244048e0/R/plotting.R#L67

similar issue raised in #14

j-lawson commented 4 years ago

Hi Nathan,

The function documentation indicates that "sampleName" is a required column. When sampleName is a column in the input data.frame, it can be referred to without quotes in ggplot.

nsheff commented 4 years ago

I see. probably not the best way to do things, though. something should check and catch that, then.

I am trying to use mira and struggling with some of the UI, so I might take a shot at revamping a few things if I can get to it