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databio / bbconf

Configuration package for bedbase project
https://pypi.org/project/bbconf/
BSD 2-Clause "Simplified" License
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bbconf broken with pipestat updates #31

Closed nsheff closed 8 months ago

nsheff commented 8 months ago

pipestat updates have broken bbconf: 

 from bbconf import BedBaseConf
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/nsheff/.local/lib/python3.11/site-packages/bbconf/__init__.py", line 2, in <module>
    from bbconf.bbconf import *
  File "/home/nsheff/.local/lib/python3.11/site-packages/bbconf/bbconf.py", line 9, in <module>
    from pipestat.helpers import dynamic_filter
ImportError: cannot import name 'dynamic_filter' from 'pipestat.helpers' (/home/nsheff/.local/lib/python3.11/site-packages/pipestat/helpers.py)
nsheff commented 8 months ago

if dynamic_filter depends on the db backend,

then, ideally, bbconf would not be depending on it anyway...

nsheff commented 8 months ago

I think that fixed it.