databio / bds_hackathon

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Prepare MeSH terms for integration with Wikidata #6

Closed Daniel-Mietchen closed 6 years ago

Daniel-Mietchen commented 6 years ago

This ticket is just to report on a side project: there is a tool called Mix'n Match that can be used to match concepts between Wikidata and external IDs.

Medical Subject Headings are a set of such external IDs that has not been completely mapped to Wikidata (and that is evolving too). 3 subcatalogs of MeSH had already been imported into Mix'n Match by @stuppie, who provided me with source files for the other 13 subcatalogs that I then simply imported into Mix'n Match. To see them and help match the concepts, go here and search for "MeSH" on that page, then select any of the hits.

Daniel-Mietchen commented 6 years ago

Thanks to another tool by @magnusmanske that I tested today, reporting on the progress of the MeSH integration into Wikidata simply amounts to running a SPARQL query and checking whether the results have been edited during the time of interest:

SELECT ?q { ?q wdt:P486 ?MeSH . }

between

2017110705

and

2017110805

This gives

Total number of items : 10529 951 items have changed between 2017-11-07 05:: and 2017-11-08 05::