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databio / bedboss

Python pipeline for processing BED files for BEDbase
https://docs.bedbase.org
BSD 2-Clause "Simplified" License
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Allow uploading meta data from input pep to an output pep via registry path #33

Closed donaldcampbelljr closed 7 months ago

donaldcampbelljr commented 7 months ago

Allow uploading meta data from input pep to an output pep via registry paths.

Currently, the output PEP for all of this processing is: https://pephub.databio.org/databio/allbeds?tag=bedbase

command examples:

bedboss insert --bedbase-config bedboss_config.yaml --pep donaldcampbelljr/test_minimal_bedboss:samples --output-folder ./bedbossoutput --skip-qdrant --upload-pephub
donaldcampbelljr commented 7 months ago

Closes https://github.com/databio/bedboss/issues/31