Bed cache

[khoroshevskyi]

• Added bed caching using bbclient
• Created Uploading class, which handles uploading to pephub, s3, bedbase, and qdrant
• switched uploading to s3 cli to boto3
• Moved uploading from stats model to bedboss
• standardized stats and metadata dicts by using pydantic
• added tracking of uploaded files to s3 to a new column
• • cleaned repository
• [x] #27
• [x] #50
• [x] #51
• [x] #53