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databio / bedhost

API and UI for BEDbase
http://api.bedbase.org
BSD 2-Clause "Simplified" License
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search BED files with given genome interval: error with remote file path #60

Closed xuebingjie1990 closed 9 months ago

xuebingjie1990 commented 2 years ago

Error with remote file path:

Command: bedIntersect /tmp/tmp3oqkdmhe http://data.bedbase.org/bed_files/GSM2827349_ENCFF196DNQ_peaks_GRCh38.bed.gz stdout | wc -l
Couldn't open http://data.bedbase.org/bed_files/GSM2827349_ENCFF196DNQ_peaks_GRCh38.bed.gz , No such file or directory
nsheff commented 11 months ago

@xuebingjie1990 can you clarify this error? I do not understand what you are trying to say.

khoroshevskyi commented 9 months ago

Is this still an error?

khoroshevskyi commented 9 months ago

I assume this is a very old issue, as we changed api, and we should not have this issue anymore.

xuebingjie1990 commented 7 months ago

This was resovled.