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databio / gtars

Performance-critical tools to manipulate, analyze, and process genomic interval data. Primarily focused on building tools for geniml - our genomic machine learning python package.
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Add bam support for counting intervals #40

Open donaldcampbelljr opened 1 month ago

donaldcampbelljr commented 1 month ago

This pull request shows code that uses noodles and bigTools crates to read .bam files and export the counts to:

Addresses #30