There are still overlapping peaks in the *_peaks_normalized.narrowPeak file for samples and in produced consensus peak set for project

databio / pepatac

A modular, containerized pipeline for ATAC-seq data processing

http://pepatac.databio.org

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There are still overlapping peaks in the *_peaks_normalized.narrowPeak file for samples and in produced consensus peak set for project #253

Open yqlan opened 8 months ago

yqlan commented 8 months ago

I first ran looper run without a reference peak set, then ran looper runp. It seems there are still overlapping peaks in *_peaks_normalized.narrowPeak file for samples and in produced consensus peak set for project. Is this right?