datacarpentry / python-ecology-lesson

Data Analysis and Visualization in Python for Ecologists
https://datacarpentry.org/python-ecology-lesson
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Topic suggestion - calculating diversity metrics with scikit-bio #524

Open bo-maxwell-stevens opened 1 year ago

bo-maxwell-stevens commented 1 year ago

Howdy,

I think it would be a useful skill for ecologist using python to get hands on experience with the scikit-bio bioinformatics package. I use it often to calculate alpha and beta diversity and to create PCoA plots for visualizing community data.

I'd be happy to help with a Jupyter notebook example.

Bo