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datacarpentry / wrangling-genomics

Data Wrangling and Processing for Genomics
https://datacarpentry.org/wrangling-genomics/
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Adapter and over-represented sequence results from a fastqc report #118

Open methylnick opened 6 years ago

methylnick commented 6 years ago

I think as a good segue to trimming and trimmomatic, there could be some mention of the other features of fastqc, in that it searches for sequencing adaptor content and can report this. Over-represented sequences plot could also be diagnostic of the sequencing library.

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sstevens2 commented 5 years ago

AZ bbq: We agree there could be more resources on how to interpret the fastqc added to the lesson