datacite / bolognese

Ruby gem and command-line utility for conversion of DOI metadata
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Case study for JATS export #18

Closed mfenner closed 6 years ago

mfenner commented 7 years ago

References for DOI https://doi.org/10.7554/elife.01567

[{
    "type": "CreativeWork",
    "id": "https://doi.org/10.1038/nature02100",
    "title": "APL regulates vascular tissue identity in Arabidopsis"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1534/genetics.109.104976",
    "title": "In the beginning was the worm"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1034/j.1399-3054.2002.1140413.x",
    "title": "Secondary xylem development in Arabidopsis: a model for wood formation"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1162/089976601750399335",
    "title": "Training nu-support vector classifiers: theory and algorithms"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1007/bf00994018",
    "title": "Support-vector Networks"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1016/j.semcdb.2009.09.009",
    "title": "Stem cell function during plant vascular development"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1242/dev.091314",
    "title": "WOX4 and WOX14 act downstream of the PXY receptor kinase to regulate plant vascular proliferation independently of any role in vascular organisation"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1371/journal.pgen.1002997",
    "title": "Plant vascular cell division is maintained by an interaction between PXY and ethylene signalling"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1038/msb.2010.25",
    "title": "Clustering phenotype populations by genome-wide RNAi and multiparametric imaging"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1016/j.biosystems.2012.07.004",
    "title": "BaSAR-A tool in R for frequency detection"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1016/j.pbi.2005.11.013",
    "title": "Developmental mechanisms regulating secondary growth in woody plants"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1105/tpc.110.076083",
    "title": "TDIF peptide signaling regulates vascular stem cell proliferation via the WOX4 homeobox gene in Arabidopsis"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1073/pnas.0808444105",
    "title": "Non-cell-autonomous control of vascular stem cell fate by a CLE peptide/receptor system"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1016/0092-8674(89)90900-8",
    "title": "Arabidopsis, a useful weed"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1126/science.1066609",
    "title": "Plants compared to animals: the broadest comparative study of development"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1104/pp.104.040212",
    "title": "A weed for wood? Arabidopsis as a genetic model for xylem development"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1038/nbt1206-1565",
    "title": "What is a support vector machine?"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1073/pnas.77.3.1516",
    "title": "Classification of cultured mammalian cells by shape analysis and pattern recognition"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1093/bioinformatics/btq046",
    "title": "EBImage–an R package for image processing with applications to cellular phenotypes"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1105/tpc.111.084020",
    "title": "Mobile gibberellin directly stimulates Arabidopsis hypocotyl xylem expansion"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.5061/dryad.b835k",
    "title": "Data from: Automated quantitative histology reveals vascular morphodynamics during Arabidopsis hypocotyl secondary growth"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1016/j.cub.2008.02.070",
    "title": "Flowering as a condition for xylem expansion in Arabidopsis hypocotyl and root"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1111/j.1469-8137.2010.03236.x",
    "title": "Evolution of development of vascular cambia and secondary growth"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1007/s00138-011-0345-9",
    "title": "Cell morphology classification and clutter mitigation in phase-contrast microscopy images using machine learning"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1016/j.cell.2012.02.048",
    "title": "Mechanical stress acts via katanin to amplify differences in growth rate between adjacent cells in Arabidopsis"
}, {
    "type": "CreativeWork",
    "id": "https://doi.org/10.1038/ncb2764",
    "title": "A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes"
}]
mfenner commented 7 years ago

Crossref content types used by bolognese:

https://github.com/datacite/bolognese/blob/02cc233ffc7c62836d46cd973cc44beafc6160e0/lib/bolognese/utils.rb#L45-L71

@oliver----

mfenner commented 7 years ago

Deployed to DataCite Content Negotation: https://data.datacite.org/application/vnd.jats+xml/10.7554/elife.01567