We need a way to validate accession number for top 20 repository assertions from CZI.
closes: #18
Approach
Processing repository_id: 00363b65-f3ef-4fa9-8255-23ab269f4930
Number of rows fetched: 3755354
CSV file created: accession_number_validation_data/00363b65-f3ef-4fa9-8255-23ab269f4930.csv
Time taken for repository_id 00363b65-f3ef-4fa9-8255-23ab269f4930: 4 minutes 33 seconds
Processing repository_id: 87646104-e5ef-494b-b2f3-a46c9572e003
Number of rows fetched: 1729783
CSV file created: accession_number_validation_data/87646104-e5ef-494b-b2f3-a46c9572e003.csv
Time taken for repository_id 87646104-e5ef-494b-b2f3-a46c9572e003: 1 minutes 40 seconds
Processing repository_id: 6087b2e9-ecbf-4898-8047-5f484f1bce2f
Number of rows fetched: 890431
CSV file created: accession_number_validation_data/6087b2e9-ecbf-4898-8047-5f484f1bce2f.csv
Time taken for repository_id 6087b2e9-ecbf-4898-8047-5f484f1bce2f: 1 minutes 16 seconds
Processing repository_id: b2a4aa2b-db3f-456a-8e2b-7d935343385e
Number of rows fetched: 489706
CSV file created: accession_number_validation_data/b2a4aa2b-db3f-456a-8e2b-7d935343385e.csv
Time taken for repository_id b2a4aa2b-db3f-456a-8e2b-7d935343385e: 0 minutes 24 seconds
Processing repository_id: 1edec4bf-cfee-4296-8893-d1b0ca528f92
Number of rows fetched: 259548
CSV file created: accession_number_validation_data/1edec4bf-cfee-4296-8893-d1b0ca528f92.csv
Time taken for repository_id 1edec4bf-cfee-4296-8893-d1b0ca528f92: 0 minutes 19 seconds
Processing repository_id: 58d689da-7c8c-4ac1-90c9-69253d28f81f
Number of rows fetched: 257986
CSV file created: accession_number_validation_data/58d689da-7c8c-4ac1-90c9-69253d28f81f.csv
Time taken for repository_id 58d689da-7c8c-4ac1-90c9-69253d28f81f: 0 minutes 15 seconds
Processing repository_id: 5f36c68f-bb46-4a21-9b95-6bb87de12aa0
Number of rows fetched: 113611
CSV file created: accession_number_validation_data/5f36c68f-bb46-4a21-9b95-6bb87de12aa0.csv
Time taken for repository_id 5f36c68f-bb46-4a21-9b95-6bb87de12aa0: 0 minutes 8 seconds
Processing repository_id: 8d9c72f8-7b96-4b5c-86b0-b3f0dd7d0b0d
Number of rows fetched: 106217
CSV file created: accession_number_validation_data/8d9c72f8-7b96-4b5c-86b0-b3f0dd7d0b0d.csv
Time taken for repository_id 8d9c72f8-7b96-4b5c-86b0-b3f0dd7d0b0d: 0 minutes 7 seconds
Processing repository_id: 19ad31a7-e6d0-4547-ad14-1201d3c96dca
Number of rows fetched: 32617
CSV file created: accession_number_validation_data/19ad31a7-e6d0-4547-ad14-1201d3c96dca.csv
Time taken for repository_id 19ad31a7-e6d0-4547-ad14-1201d3c96dca: 0 minutes 4 seconds
Processing repository_id: 524e4405-f959-4e3c-ab4e-eecaa8ed23d5
Number of rows fetched: 24411
CSV file created: accession_number_validation_data/524e4405-f959-4e3c-ab4e-eecaa8ed23d5.csv
Time taken for repository_id 524e4405-f959-4e3c-ab4e-eecaa8ed23d5: 0 minutes 1 seconds
Processing repository_id: 1f463165-6957-491b-a1e1-e484540200f0
Number of rows fetched: 22729
CSV file created: accession_number_validation_data/1f463165-6957-491b-a1e1-e484540200f0.csv
Time taken for repository_id 1f463165-6957-491b-a1e1-e484540200f0: 0 minutes 5 seconds
Processing repository_id: 79760077-45df-4626-9675-60ee459aa283
Number of rows fetched: 15817
CSV file created: accession_number_validation_data/79760077-45df-4626-9675-60ee459aa283.csv
Time taken for repository_id 79760077-45df-4626-9675-60ee459aa283: 0 minutes 1 seconds
Processing repository_id: b5966ef4-8bd3-4de8-aafb-396df8e75b0b
Number of rows fetched: 13310
CSV file created: accession_number_validation_data/b5966ef4-8bd3-4de8-aafb-396df8e75b0b.csv
Time taken for repository_id b5966ef4-8bd3-4de8-aafb-396df8e75b0b: 0 minutes 1 seconds
Processing repository_id: 8748538d-965e-4440-85cc-d9d1722e7ca9
Number of rows fetched: 10370
CSV file created: accession_number_validation_data/8748538d-965e-4440-85cc-d9d1722e7ca9.csv
Time taken for repository_id 8748538d-965e-4440-85cc-d9d1722e7ca9: 0 minutes 1 seconds
Processing repository_id: 66807551-597e-4088-9743-32690481f6ff
Number of rows fetched: 10106
CSV file created: accession_number_validation_data/66807551-597e-4088-9743-32690481f6ff.csv
Time taken for repository_id 66807551-597e-4088-9743-32690481f6ff: 0 minutes 1 seconds
Processing repository_id: b4440b59-ca28-4a67-a65f-2dc02fb0aa23
Number of rows fetched: 7993
CSV file created: accession_number_validation_data/b4440b59-ca28-4a67-a65f-2dc02fb0aa23.csv
Time taken for repository_id b4440b59-ca28-4a67-a65f-2dc02fb0aa23: 0 minutes 1 seconds
Processing repository_id: f43825eb-5b72-4f1a-b716-dc7eec6d4206
Number of rows fetched: 6605
CSV file created: accession_number_validation_data/f43825eb-5b72-4f1a-b716-dc7eec6d4206.csv
Time taken for repository_id f43825eb-5b72-4f1a-b716-dc7eec6d4206: 0 minutes 0 seconds
Processing repository_id: c908c286-c01b-44c7-bac9-3bd53148d898
Number of rows fetched: 3430
CSV file created: accession_number_validation_data/c908c286-c01b-44c7-bac9-3bd53148d898.csv
Time taken for repository_id c908c286-c01b-44c7-bac9-3bd53148d898: 0 minutes 0 seconds
Processing repository_id: 345977e0-6fb8-476e-9742-0b8987e2fce8
Number of rows fetched: 3324
CSV file created: accession_number_validation_data/345977e0-6fb8-476e-9742-0b8987e2fce8.csv
Time taken for repository_id 345977e0-6fb8-476e-9742-0b8987e2fce8: 0 minutes 0 seconds
Processing repository_id: 0a60b1a9-041a-444e-bd6a-94caaab7591b
Number of rows fetched: 2838
CSV file created: accession_number_validation_data/0a60b1a9-041a-444e-bd6a-94caaab7591b.csv
Time taken for repository_id 0a60b1a9-041a-444e-bd6a-94caaab7591b: 0 minutes 0 seconds
Total time taken: 9 minutes 7 seconds
Open Questions and Pre-Merge TODOs
Learning
Types of changes
[ ] Bug fix (non-breaking change which fixes an issue)
[ ] New feature (non-breaking change which adds functionality)
[ ] Breaking change (fix or feature that would cause existing functionality to change)
Be humble in the language and feedback you give, ask don't tell.
Consider using positive language as opposed to neutral when offering feedback. This is to avoid the negative bias that can occur with neutral language appearing negative.
Offer suggestions on how to improve code e.g. simplification or expanding clarity.
Ensure you give reasons for the changes you are proposing.
Purpose
We need a way to validate accession number for top 20 repository assertions from CZI.
closes: #18
Approach
Open Questions and Pre-Merge TODOs
Learning
Types of changes
[ ] Bug fix (non-breaking change which fixes an issue)
[ ] New feature (non-breaking change which adds functionality)
[ ] Breaking change (fix or feature that would cause existing functionality to change)
Reviewer, please remember our guidelines: