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datajoint-company / DJ-NWB-Li-Daie-2015-2016

DataJoint-NWB conversion project for Li et al., 2015 and Li, Daie, et al., 2016 paper
MIT License
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NWB Export: Add device descriptions #8

Open rly opened 4 years ago

rly commented 4 years ago

The electrode device is currently just an obscure part number, e.g. "A4x8-5mm-100-200-177". It would be helpful to have a description of what the device actually is. For Li et al., 2015, you could set the device description to "NeuroNexus silicon probes (part no. A4x8-5mm-100-200-177). The 32 channel voltage signals were multiplexed, recorded on a PCI6133 board at 312.5 kHz (National instrument), and digitized at 14 bit. The signals were demultiplexed into the 32 voltage traces, sampled at 19531.25 Hz and stored for offline analyses."

https://github.com/vathes/DJ-NWB-Li-Daie-2015-2016/blob/ae69335a23e6a3c0c3809a54de5480baf8848712/pipeline/export/datajoint_to_nwb.py#L96

rly commented 4 years ago

My apologies -- this requires changes to the schema first, e.g., https://github.com/NeurodataWithoutBorders/nwb-schema/issues/258

I'll let you know when a description field is possible.