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datalad / datalad-ukbiobank

Resources for working with UKBiobank as a DataLad dataset
MIT License
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UKBB possible steps for row data laid out by Michael #6

Closed jbpoline closed 4 years ago

jbpoline commented 4 years ago

@mih : lmk if I missed anything

  1. Dowload -> UKBB zip
  2. DL save in branch incoming
  3. DL add-archive in branch incoming-processed Note: this is to extract the zip - see add-archive DL command
  4. git merge incoming-processed in master
  5. DL drop all extracted
  6. config RIA special remote pointing to actual storing
  7. DL publish onto storage Note: actual repo nees to be also pushed somewhere
  8. throw away local clones
  9. create BIDS - code lives on super DS
mih commented 4 years ago

Everything until 4 is now implemented and merged into master.

9 is coming for a single participant in #13

This rest is generic functionality that is available in https://github.com/datalad/git-annex-ria-remote at the moment, and individual PRs to merge it into DataLad proper are opened, such as https://github.com/datalad/datalad/pull/4124

I will close this issue, it has served its purpose.