Merge docstring_branch with dev-master

[grabear]

Contributions Made

General

• Added a .gitattributes file
• Updated the main README
• Updated comments and docstrings
  • Cookies
  • Manager
  • Align
  • Blast
  • GenBank

Cookies Module

• Updated the docstring and comments
• Changed CookieRecipes class to CookBook class
  • Contains the paths to the cookiecutter templates
• Oven class parameters and attributes
  • Recipes attribute is composed of the CookieRecipes attributes
  • Ingredients is a dictionary of the Oven class attributes (repo, project, etc.)

Manager Module

• Update the DatabaseManagement class by implementing the new configuration function

Align Module

• Updated some attribute names

Blast Module

• Added an example Accession file table in Markdown and explained the format

GenBank

• Added a Quality Control method that checks the target GenBank file for proper gene/org
• Added a test .gbk file (HTR1A, Home_sapiens)