Requirements - Githubissues

datasnakes / OrthoEvolution

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

https://orthoevolution.readthedocs.io/en/master/

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Requirements #12

Closed sdhutchins closed 6 years ago

sdhutchins commented 7 years ago

So far this is the list of requirements I have. I used pipreqs to get this list.

ete3==3.0.0b35
pandas==0.19.2
pexpect==4.2.1
slacker==0.9.42
biopython==1.68
tablib==0.11.4
mygene==3.0.0
cookiecutter==1.5.1
flask==0.12

pip install pipreqs Then, pipreqs [options] <path>

Please add any other non distribution-python packages.

sdhutchins commented 7 years ago

Current list of requirements:

ete3==3.0.0b35
pandas==0.19.2
openpyxl==2.4.7
pexpect==4.2.1
slacker==0.9.42
biopython==1.68
numpy==1.12.0
tablib==0.11.4
mygene==3.0.0
cookiecutter==1.5.1
Flask==0.12.1
Flask-Login==0.4.0
Flask-Mail==0.9.1
Flask-SQLAlchemy==2.2
Flask-User==0.6.11
Flask-WTF==0.14.2
treelib==1.3.5
psutil==5.1.3

@grabear

sdhutchins commented 6 years ago

Current list is:

ete3>=3.0.0b35
pandas>=0.19.2
openpyxl>=2.4.7
pexpect==4.2.1
slacker==0.9.42
biopython==1.70
tablib==0.11.4
mygene==3.0.0
cookiecutter==1.5.1
Flask==0.12.1
Flask-Login==0.4.0
Flask-Mail==0.9.1
Flask-SQLAlchemy==2.2
Flask-User==0.6.13
Flask-WTF>=0.14.2
treelib==1.3.5
psutil==5.2.2
luigi==2.3.0
sciluigi==0.9.5b6
logzero>=1.2.1

sdhutchins commented 6 years ago

Added pyyaml 2fb5f19fb0efa418089160585db719e85836fbdd

sdhutchins commented 6 years ago

We're up to date on this. Ready to close this.