When I try to run the script I get the following errors.
I setup the database and was able to run covid19-ingest.sh, but not covid19-refine.sh
./covid19-refine.sh
Checking latest data from JHU...
Starting OpenRefine Automation!\n Creating geocoded location lookup...
sed: workdir/location-lookup/covid-19-locations-recipe.json: No such file or directory
readlink: illegal option -- f
usage: readlink [-n] [file ...]
readlink: illegal option -- f
usage: readlink [-n] [file ...]
readlink: illegal option -- m
usage: readlink [-n] [file ...]
mkdir: : No such file or directory
please provide path to directory for exported files (and OpenRefine workspace)
example: ./openrefine-batch.sh -c output/
Normalizing data...
readlink: illegal option -- f
usage: readlink [-n] [file ...]
readlink: illegal option -- f
usage: readlink [-n] [file ...]
readlink: illegal option -- m
usage: readlink [-n] [file ...]
mkdir: : No such file or directory
readlink: illegal option -- f
usage: readlink [-n] [file ...]
please provide path to directory for exported files (and OpenRefine workspace)
example: ./openrefine-batch.sh -c output/
Copying to database...
Creating geocoded location lookup table...FileNotFoundError: [Errno 2] No such file or directory: 'workdir/location-lookup/output/location-lookup.csv'
COPY 0
UPDATE 0
Populating deaths table...workdir/normalize/output/time_series_19-covid-Deaths.csv: No such file or directory
Populating confirmed table...workdir/normalize/output/time_series_19-covid-Confirmed.csv: No such file or directory
Populating recovered table...workdir/normalize/output/time_series_19-covid-Recovered.csv: No such file or directory
Collating normalized data...
When I try to run the script I get the following errors.
I setup the database and was able to run covid19-ingest.sh, but not covid19-refine.sh
./covid19-refine.sh
Checking latest data from JHU...
Deriving Daily Counts...
Vacuuming/Analyzing database... 0 rows
0 locations
Run time: 1 seconds