search

datirium / scidap

Scientific Data Analysis Platform
https://scidap.com/
Apache License 2.0
0 stars 3 forks source link

Use alias from upstream analysis as workflow input #6

Closed michael-kotliar closed 4 years ago

michael-kotliar commented 5 years ago

It would be nice to have something like this 

  legend_name:
    type:
      - "null"
      - string[]
    label: "Isoform expression file aliases"
    doc: "Aliases to make the legend for generated plots. Order corresponds to the isoform expression files"
    'sd:upstreamSource': "rnaseq_sample/alias"
    'sd:localLabel': true

Currently, only actual workflow input can be used as upstream source, whereas alias comes from sd:metadata of the upstream analysis.

See this as a workflow example https://github.com/datirium/workflows/blob/7518b100d8cbc80c8be32e9e939dfbb27d6b4361/workflows/pca.cwl#L35