dattalab / jax-moseq

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Robust arhmm implementation #11

Closed wingillis closed 1 year ago

wingillis commented 1 year ago

Added capabilities to run an AR-HMM with robust autoregression.

I haven't tested these functions to make sure they produce the exact same results as pybasicbayes, but I closely followed the algorithms written in pybasicbayes, and reformatted some places to allow the jax-moseq version to work on all states simultaneously.

I'm sure there are ways we can optimize the code written here, as this was a first attempt.