No table generated by `interactive_group_setting`

[calebweinreb]

I get the following output when running interactive_group_setting:

Is that intended? Or are there supposed to be rows for the various recordings? My index.yaml file seems to be fully populated:

files:
- filename: 21_11_8_one_mouse.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: ae4f8e94-53e3-49a0-8cd6-8ae29ad63952
- filename: 21_12_10_def6a_1_1.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: 217f6b8c-cfb9-4e3a-90fc-d2d7d6c1e8ec
- filename: 21_12_10_def6a_3.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: 558adfe5-3351-4244-971c-5ad5345b2481
- filename: 21_12_10_def6b_3.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: bd58f1ed-e3c3-4bfc-8f3c-3b75e7f523bf
- filename: 21_12_2_def6a_1.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: 1d588560-104a-41c5-9c60-ce332380c8a2
- filename: 21_12_2_def6b_2.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: cadc2edb-5ccd-490d-9f89-7783470c611e
- filename: 22_04_26_cage4_0.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: 3853f96f-a62a-4af3-8a62-199de2a0688b
- filename: 22_04_26_cage4_0_2.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: e7608a8e-d6e0-43ab-a855-d4070ecfaa06
- filename: 22_04_26_cage4_1_1.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: e402beff-acb0-4e2d-9cd8-9835a80c5ee5
- filename: 22_27_04_cage4_mouse2_0.top.irDLC_resnet50_moseq_exampleAug21shuffle1_500000
  group: default
  uuid: 053f1e4e-15c4-4dc3-804d-972c22fa571a

and here's my progress.yaml file

base_dir: demo_project/
config_file: demo_project/config.yml
crowd_movie_dir: demo_project/2023_05_23-15_19_03/crowd_movies
grid_movie_dir: demo_project/2023_05_23-15_19_03/grid_movies
index_file: demo_project/index.yaml
model_checkpoint: demo_project/2023_05_23-15_19_03/checkpoint.p
model_dir: demo_project/2023_05_23-15_19_03/
model_name: 2023_05_23-15_19_03/
model_results: demo_project/2023_05_23-15_19_03/results.h5
plot_dir: demo_project/2023_05_23-15_19_03/plots
progress_filepath: demo_project/progress.yaml
syll_info_path: demo_project/syll_info.yaml
trajectory_plot_dir: demo_project/2023_05_23-15_19_03/trajectory_plots

[versey-sherry]

It looks like qgrid is not sucessfully installed, could you try re-installing with the most updated setup.cfg?

[calebweinreb]

I did that but the issue is still present. I have qgrid 1.3.1 and jupyter-bokeh 2.0.3

[calebweinreb]

I'm still having this issue even after all the jupyter extensions are loaded correctly. E.g. when I run:

# Install and Enable widget extensions configurator
!jupyter nbextension install --py jupyter_nbextensions_configurator --sys-prefix
!jupyter nbextension enable --py --sys-prefix widgetsnbextension
!jupyter nbextension enable --py --sys-prefix  --py qgrid

# Install bokeh extensions
!jupyter nbextension install --sys-prefix --symlink --py jupyter_bokeh
!jupyter nbextension enable jupyter_bokeh --py --sys-prefix

I get this following output (which says qgrid is loaded correctly)

Installing /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/lib/python3.9/site-packages/jupyter_nbextensions_configurator/static/nbextensions_configurator -> nbextensions_configurator
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/icon.png
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/main.css
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/readme.md
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/main.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/quickhelp_shim.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/kse_components.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/config_menu/config_menu.yaml
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/config_menu/icon.png
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/config_menu/main.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/tree_tab.yaml
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/icon.png
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/readme.md
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/main.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/render/video_play.svg
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/render/render.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/render/rendermd.css
- Validating: OK
Installing /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/lib/python3.9/site-packages/jupyter_nbextensions_configurator/static/nbextensions_configurator -> nbextensions_configurator
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/icon.png
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/main.css
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/readme.md
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/main.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/quickhelp_shim.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/kse_components.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/config_menu/config_menu.yaml
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/config_menu/icon.png
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/config_menu/main.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/tree_tab.yaml
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/icon.png
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/readme.md
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/tree_tab/main.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/render/video_play.svg
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/render/render.js
Up to date: /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/share/jupyter/nbextensions/nbextensions_configurator/render/rendermd.css
- Validating: OK

    To initialize this nbextension in the browser every time the notebook (or other app) loads:

          jupyter nbextension enable jupyter_nbextensions_configurator --py --sys-prefix

Enabling notebook extension jupyter-js-widgets/extension...
      - Validating: OK
Enabling notebook extension qgrid/extension...
      - Validating: OK
Installing /Users/calebweinreb/miniconda3/envs/keypoint_moseq_test/lib/python3.9/site-packages/jupyter_bokeh/nbextension/static -> jupyter_bokeh
- Validating: OK

    To initialize this nbextension in the browser every time the notebook (or other app) loads:

          jupyter nbextension enable jupyter_bokeh --py --sys-prefix

Enabling notebook extension jupyter_bokeh/extension...
      - Validating: OK

[versey-sherry]

The jupyter server needs to be restarted for the extensions to work : f74cf3b23dcd1e6d126134e8e831f0d70f3a01b6