Closed alisabak closed 10 months ago
Hello,
Thanks for opening an issue and providing the example data! The problem was caused by the code assuming DLC csv files always have 3 header lines, whereas for multi-animal data there are 4 header lines. I fixed it here https://github.com/dattalab/keypoint-moseq/commit/166098fb8248520ed4db25668272056e755db705.
You can avoid this issue either by installing the most up-to-date code from github, or by reading in the DLC results as h5 files.
Thank you, it works now!
Hi! I am trying to run keypoint-Moseq on the DLC data from videos with two animals (OS is Windows 11). I am getting the following error when running
coordinates, confidences, bodyparts = kpms.load_keypoints(keypoint_data_path, 'deeplabcut')
Here is an example of an input csv file Test 4_SDS2leftDLC_dlcrnetms5_top_camera_2miceAug7shuffle1_120000_el.csv
And config file for the Moseq project config-txt.txt
I would greatly appreciate your help!