Closed ryanschwark closed 1 year ago
Both of these errors can be addressed by using the more up-to-date function calls from the tutorial https://keypoint-moseq.readthedocs.io/en/latest/modeling.html#extract-model-results
Thank you! Using the newer code solved the issue.
**Hi all,
After successfully training a full model using the Jupyter notebook, the next cells should allow me to extract model results and save results in CSV format. However, when I run these cells I get this NameError:**
load saved model checkpoint checkpoint = kpms.load_checkpoint(project_dir=project_dir, name=name) extract results results = kpms.extract_results(project_dir=project_dir, config(), checkpoint)
NameError Traceback (most recent call last) Cell In[40], line 2 1 # load saved model checkpoint ----> 2 checkpoint = kpms.load_checkpoint(project_dir=project_dir, name=name) 4 # extract results 5 results = kpms.extract_results(project_dir=project_dir, config(), checkpoint)
NameError: name 'name' is not defined
What might be causing this error? Relaunching the Jupyter notebook doesn't solve the issue, and I get the same error for trying to save results in csv format:
optionally save results as csv kpms.save_results_as_csv(project_dir=project_dir, name=name, **config())
NameError Traceback (most recent call last) Cell In[41], line 2 1 # optionally save results as csv ----> 2 kpms.save_results_as_csv(project_dir=project_dir, name=name, **config())
NameError: name 'name' is not defined
Thanks!