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dauparas / LigandMPNN

MIT License
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Multiple sequence design for one target #26

Closed lzygitk7 closed 6 months ago

lzygitk7 commented 6 months ago

Does LigandMPNN have the same argument as ProteinMPNN?

argparser.add_argument("--num_seq_per_target", type=int, default=1, help="Number of sequences to generate per target")

The side chain argument: --number_of_packs_per_design does not seem to affect the protein sequence level. Or LigandMPNN can only generate one sequence per target?

ShuhaoGithub commented 6 months ago

(Not author) It's replaced by number of batches and batch size.

lzygitk7 commented 6 months ago

(Not author) It's replaced by number of batches and batch size.

Got it. Thank you very much.