search

dauparas / ProteinMPNN

Code for the ProteinMPNN paper
MIT License
934 stars 284 forks source link

OSError: [Errno 22] Invalid argument: 'inputs/*pdb' .How do fix this bug? #49

Closed DragonReed closed 1 year ago

DragonReed commented 1 year ago

Traceback (most recent call last): File "E:\GitHub\ProteinMPNN\protein_mpnn_run.py", line 466, in main(args) File "E:\GitHub\ProteinMPNN\protein_mpnn_run.py", line 162, in main pdb_dict_list = parse_PDB(args.pdb_path, ca_only=args.ca_only) File "E:\GitHub\ProteinMPNN\protein_mpnn_utils.py", line 166, in parse_PDB xyz, seq = parse_PDB_biounits(biounit, atoms=sidechain_atoms, chain=letter) File "E:\GitHub\ProteinMPNN\protein_mpnn_utils.py", line 85, in parse_PDB_biounits for line in open(x,"rb"): OSError: [Errno 22] Invalid argument: 'inputs/*pdb'

dauparas commented 1 year ago

You can only pass one PDB path as an input when using --pdb_path option.