david-barnett / microViz

R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
https://david-barnett.github.io/microViz/
GNU General Public License v3.0
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Tax fix with a minimum length of zero still removes/replaces empty strings #97

Open david-barnett opened 1 year ago

david-barnett commented 1 year ago

If during complex taxonomy table repairs, you want to replace unknowns, but not empty strings you cannot currently do this with tax fix

The solution is probably to use NAchar as an intermediate placeholder, instead of an empty string, in tax fix