davidebolo1993
commented
3 years ago Hi Rebecca,
sorry for being late on this but I'm currently on vacation. One can simply run "df -h" to check available storage. Which version of VISOR are you using? There have been updates since February if I remember correctly.
Thanks,
Davide
Il giorno lun 16 ago 2021 alle ore 05:01 SQLiu-youyou < @.***> ha scritto:
Hello，thanks for your VISOR!
I'm trapped in some trouble about VISOR. When simulating the whole genome using CCS(the previous version) parameter, VISOR completed successfully with a normal log but didn't have .bai file. When calling the variant through callers, the error "file may be truncated" appeared. I realized the bam file may be not incomplete, but I don't know why. Maybe the There is not enough storage space？ Because I successfully run the VISOR use CCS parameter in February 2021. And when simulating the chr22, VISOR can successfully generate .bai file.
Best regards, Rebecca
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-- Davide Bolognini, PhD Unit of Medical Genetics Meyer Children's Hospital
Hello，thanks for your VISOR!
I'm trapped in some trouble about VISOR. When simulating the whole genome using CCS(the previous version) parameter, VISOR completed successfully with a normal log but didn't have .bai file. When calling the variant through callers, the error "file may be truncated" appeared. I realized the bam file may be not incomplete, but I don't know why. Maybe the There is not enough storage space？ Because I successfully run the VISOR use CCS parameter in February 2021. And when simulating the chr22, VISOR can successfully generate .bai file.
Best regards, Rebecca