davidkartchner biomedical-entity-linking issues

davidkartchner / biomedical-entity-linking

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python: can't open file 'biomedical-entity-linking/scripts/extract_document_text.py': [Errno 2] No such file or directory

#43 fangzhouli opened 3 months ago
1
readding ontology

#42 batuinmetz closed 5 months ago
0
SAPBERT Implementation

#41 prasbathala opened 5 months ago
0
Krissbert Implementation

#40 shubhlohiya closed 5 months ago
0
BioGenEL/BioBART model updates

#39 batuinmetz opened 6 months ago
0
Add BioBART/BioGenEL

#38 batuinmetz opened 6 months ago
0
Automate creation of abbreviations.json

#37 ChristopheYe opened 7 months ago
0
Automate creation of abbreviations.json

#36 ChristopheYe opened 7 months ago
0
Changes for bigbio_utils.py

#35 ChristopheYe opened 7 months ago
0
Improve bigbio_utils

#34 ChristopheYe opened 7 months ago
0
Updating ontology load json

#33 batuinmetz closed 5 months ago
0
Add arboel

#32 ChristopheYe closed 5 months ago
0
Add arboel

#31 ChristopheYe closed 5 months ago
0
Refactored bioel into package + pubmed entity extractor

#30 shubhlohiya closed 7 months ago
0
Add arboel

#29 ChristopheYe closed 7 months ago
0
Add load_mesh in ontology.py

#28 ChristopheYe closed 7 months ago
1
Add load_mesh in ontology.py

#27 ChristopheYe opened 7 months ago
0
Add arboel (DataModule + Model)

#26 ChristopheYe closed 7 months ago
0
Add load_medic in ontology.py

#25 ChristopheYe closed 7 months ago
0
Load_Medic in the Ontology

#24 prasbathala closed 7 months ago
0
Adding Scispacy model files to bioel/models

#23 batuinmetz closed 5 months ago
2
Updated cached file opener

#22 batuinmetz closed 8 months ago
0
Making SciSpacy compatible with the new Ontology.py

#21 batuinmetz closed 5 months ago
0
19 updating ontologypy

#20 ChristopheYe closed 8 months ago
0
Updating ontology.py

#19 ChristopheYe closed 8 months ago
0
Scispacy candidate generator and entity linker

#18 batuinmetz opened 8 months ago
0
Functions for Scispacy model

#17 batuinmetz closed 7 months ago
0
SciSpacy Knowledge base class and features

#16 batuinmetz opened 9 months ago
0
Cache of previously downloaded ontologies

#15 davidkartchner opened 9 months ago
0
9 add ability to load obo objects into ontology

#14 davidkartchner closed 9 months ago
1
Added UMLS Load function

#13 prasbathala closed 7 months ago
1
Load UMLS to the Ontology

#12 prasbathala closed 7 months ago
0
Add NCBI Taxonomy loader

#11 davidkartchner opened 9 months ago
0
Load NCBI Gene (Entrez) into ontology object

#10 davidkartchner opened 9 months ago
0
Add ability to load obo objects into ontology

#9 davidkartchner closed 9 months ago
0
Reverting the deleted " Ontology file""

#8 prasbathala closed 9 months ago
0
Revert "Adding Ontology file"

#7 prasbathala closed 9 months ago
0
Adding Ontology file

#6 prasbathala closed 9 months ago
0
Add Ontology Object file

#5 prasbathala closed 9 months ago
0
Add Implementation of SAPBERT into the package

#4 prasbathala opened 10 months ago
0
Add implementation for KRISSBERT in package

#3 shubhlohiya closed 5 months ago
0
Add overall model scaffolding

#2 davidkartchner opened 10 months ago
0
Add reference to README.md

#1 davidkartchner closed 11 months ago
0